BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D05SP1|AL427001
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1300 1719 0.0
>3x_Contig1300
Length = 6589
Score = 1719 bits (862), Expect = 0.0
Identities = 873/882 (98%)
Strand = Plus / Plus
Query: 1 gatcgagatttacatacgacatgatgaaccgttatagtgccaccttacttgcagacactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1800 gatcgagatttacatacgacatgatgaaccgttatagtgccaccttacttgcagacactt 1859
Query: 61 atatgaaggtgaacggtggtcaagctcagactttcagttacatttcggctgacagaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1860 atatgaaggtgaacggtggtcaagctcagactttcagttacatttcggctgacagaggat 1919
Query: 121 tcccatcaattccaagtggatacattgattctaagagacaggccgaagaacacatttccc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1920 tcccatcaattccaagtggatatattgattctaagagacaggccgaagaacacatttccc 1979
Query: 181 aatacgggaaacagataaggtccatcattttwagacctgggtttatgtttgacgaaagaa 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1980 aatacgggaaacagataaggtccatcattttaagacctgggtttatgtttgacgaaagaa 2039
Query: 241 actctgaatcggatggaagaacgcagattcgtaatttcttgcaaatgttgaactgcggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2040 actctgaatcggatggaagaacgcagattcgtaatttcttgcaaatgttgaactgcggta 2099
Query: 301 atkaaatggtacttagacaaaarataccgtttgtcaacgaccttgtgcgaccattaatct 360
|| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2100 atgaaatggtacttagacaaaagataccgtttgtcaacgaccttgtgcgaccattaatct 2159
Query: 361 ctacacagcaagtagcacactcgttaatattagcattacaggatcccaactgtgaagggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2160 ctacacagcaagtagcacactcgttaatattagcattacaggatcccaactgtgaagggg 2219
Query: 421 tattgaccttggacgaaatgctcaagatgtaagagaatgtatcttttatttaaaacgtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2220 tattgaccttggacgaaatgctcaagatgtaagagaatgtatcttttatttaaaacgtga 2279
Query: 481 gaaataatattacaaaaagtactttattaatgaagagttataataaacatgcgatgagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2280 gaaataatattacaaaaagtactttattaatgaagagttataataaacatgcgatgagat 2339
Query: 541 atatgttccttttctaaagaaacaaatgcagtattgggaaggaaccagtcaaaaagggta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2340 atatgttccttttctaaagaaacaaatgcagtattgggaaggaaccagtcaaaaagggta 2399
Query: 601 tatagactaggtgatatcacttcagaggatctctctcttcgaagttttctttttccaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2400 tatagactaggtgatatcacttcagaggatctctctcttcgaagttttctttttccaaat 2459
Query: 661 ttcgtttaawtyatccggwtctcgtggctctgtcatcgggacgcaaacgtccacttctcc 720
||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2460 ttcgtttaattcatccggatctcgtggctctgtcatcgggacgcaaacgtccacttctcc 2519
Query: 721 ttgcagcttgacgaaccttctgtwagataaatctctaatcatcaggcaaagtaaaatgcc 780
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2520 ttgcagcttgacgaaccttctgtaagataaatctctaatcatcaggcaaagtaaaatgcc 2579
Query: 781 acttaaggccacgaagaatgcgctaactaacatcaaccaacttgaccacgtgacgtggga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2580 acttaaggccacgaagaatgcgctaactaacatcaaccaacttgaccacgtgacgtggga 2639
Query: 841 tgcaaacattaaaacgtcaataaggaatcccaaragggaaac 882
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2640 tgcaaacattaaaacgtcaataaggaatcccaagagggaaac 2681
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5778
Number of Sequences: 1807
Number of extensions: 5778
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)